CDS

Accession Number TCMCG057C16872
gbkey CDS
Protein Id XP_018477111.1
Location join(10494986..10495134,10495219..10495387,10495468..10495564,10495637..10495763,10495878..10495996,10496103..10496197,10496287..10496438,10496531..10496588,10496722..10496829,10496918..10497161,10497502..10497686,10498120..10498212,10498340..10498438,10498530..10498661,10498766..10498810,10498895..10499140,10499265..10499366)
Gene LOC108848288
GeneID 108848288
Organism Raphanus sativus

Protein

Length 739aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018621609.1
Definition PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Cleavage and polyadenylation specificity factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14402        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTACTTCGGTGCAGGTTTCTCCACTGTGCGGGGTGTACAACGAGAATCCACTCTCCTACTTAGTCTCCATCGATGGCTTCAACTTCCTCCTCGACTGTGGTTGGAACGACCTCTTTGACCCTTCTCTCCTCGAACCTCTCTCCAGGGTTGCTTCTACAGTAGACGCGGTTTTGCTTTCTCATCCAGATACGCTTCACCTCGGTGCTCTTCCTTATGCTATGAAGCAGCTTGGACTCTCTGCTCCCGTTTACGCCACTGAGCCTGTTCATAGATTAGGTCTCCTCACAATGTATGATCAGTATCTATCCAGAAAGCAAGTCTCAGACTTTGATCTGTTTACGCTGGATGACATTGATTCAGCTTTCCAGAATGTCATCAGATTGACTTTCTCTCAGAACTACCATCTTTCTGGAAAGGGAGAGGGTATTGTGATTGCTCCTCATGTTGCTGGACATATGCTGGGAGGTAGCATTTGGAAGATAACAAAGGATGGGGAGGAGGTTGTGTATGCTGTTGACTACAATCATCGGAAAGAAAGGCATTTGAACGGAACTGTTTTACAGTCTTTTGTCCGACCTGCTGTTCTGATTACCGATGCGTACAATGCTCTTTATACCAATCAAACCCAAAGCCATCACAGGGACACTGAATTTTTAGATACCATTTCAAAACATCTGGAAGTTGGGGGAAATGTTTTATTGCCAGTAGACACTGCAGGTCGAGTCTTGGAGCTTCTCTTGATACTTGAACAGCATTGGTCACAGAGAGCTTTTAGCTTTCCCATTTACTTTCTCACGTATGTGTCATCTAGCACAATTGACTATGTTAAGAGCTTCCTCGAGTGGATGAGTGACTCCATTTCAAAGTCCTTTGAGACTTCACGTGATAATGCCTTTCTATTGAGGCATGTCACTCTCTTGATAAACAAGACTGATCTGGATAATGCTCCACCTGGTCCAAAGGTTGTTCTTGCGTCCATGGCTAGTCTTGAAGCTGGATTTGCTCGAGACATATTCGTGGAATGGGCCAACGATCCCAGAAATTTAGTTCTCTTTACTGAAACAGGCCAGTTTGGCACTTTAGCTCGAATGCTTCAGTCAGCCCCACCTCCCAAATTTGTTAAAGTCACCATGTCTAAGAGGGTTCCTTTGGCCGGTGAAGAGTTGATTGCATATGAAGAGGAGCAAAACAGATTGAAGAGAGAGGAAGCCCTGCGAGCTAGCCTCGTCAAAGAGGAGGAAACGAAAGCTTCCCACGGACCTGATGAAAATTCTAGTGAACCTATGGTCGTAGATACCAAGACTACTCACGATGTTGTTGGGTCTCACGGGCCTGCATATAAAGATATATTGATAGATGGATTTGTTCCCCCATCCAGCAGCGCTGCTCCAATGTTTCCATTCTATGATAACACAGCTGACTGGGACGAGTATGGGGAGGTCATTAATCCAGATGACTATGTGATCAAGGATGAGGACATGGACCGAGGAGCAATGCATGCAGGAGGTGATGTGGATGGAAGGCTTGATGAGGCAACTGCTAGTCTCATGCTAGATACTAGACCTTCGAAAGTCATATCCAATGAGCTCATTGTGACTGTTAGTTGTTCACTTGTTAAAATGGACTACGAAGGTCGTTCAGATGGCCGTTCAATCAAGTCAACGATTGCACATGTTTCTCCTCTGAAACTTGTTCTGGTGCACGCAACAGCAGAGGCTACGGAGCATTTGAAGCAACACAGCTTGAACAGCATCTGTCCACACGTGTACGCTCCGAAAATAGAGGAAACCGTGGATGTGACTTCTGATCTATGTGCTTATAAGGTCCAACTCTCTGAAAAGCTGATGAGCAATGTGATCTTCAAGAAGCTGGGAGATTCAGAAGTAGCATGGGTGGATTCAGAAGTAGGGAAGACAGGGAGCGAGATGAGGTGTCTACAGCCAATGGGGAGTGCAGCTGCGCCTCACAAACCAGTACTAGTGGGTGATCTGAAAATGCAAGACTTCAAGCAGTTTCTGTCAAGCAAAGGAGTTCAGGTAGAGTTTGCAGGTGGAGGAGCTTTACGATGCGGTGAATATGTCACTCTGAGGAAGGTCGGTCCAACTGGTCAGAAGGGGGGAGCATCGGGGCCACAGCAAATCCTGATAGAAGGACCGTTGTGTGAAGATTATTATAAAATAAGGGACTATCTCTATTCTCAGTTTTACCTCCTCTGA
Protein:  
MGTSVQVSPLCGVYNENPLSYLVSIDGFNFLLDCGWNDLFDPSLLEPLSRVASTVDAVLLSHPDTLHLGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQYLSRKQVSDFDLFTLDDIDSAFQNVIRLTFSQNYHLSGKGEGIVIAPHVAGHMLGGSIWKITKDGEEVVYAVDYNHRKERHLNGTVLQSFVRPAVLITDAYNALYTNQTQSHHRDTEFLDTISKHLEVGGNVLLPVDTAGRVLELLLILEQHWSQRAFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAFLLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFARDIFVEWANDPRNLVLFTETGQFGTLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASHGPDENSSEPMVVDTKTTHDVVGSHGPAYKDILIDGFVPPSSSAAPMFPFYDNTADWDEYGEVINPDDYVIKDEDMDRGAMHAGGDVDGRLDEATASLMLDTRPSKVISNELIVTVSCSLVKMDYEGRSDGRSIKSTIAHVSPLKLVLVHATAEATEHLKQHSLNSICPHVYAPKIEETVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTGSEMRCLQPMGSAAAPHKPVLVGDLKMQDFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL